PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86129.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 289aa    MW: 32328.5 Da    PI: 7.8921
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000125678123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  RWR86129.1 56 YSCSFCRREFKSAQALGGHMNVH 78
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDHTGYWMCK RRKLSGGSHV LANSSSSYYN DSWEEQAFAE DSSGMLGGCI WPPRSYSCSF  60
CRREFKSAQA LGGHMNVHRR DRARLKQSPD DQQSPCTQLG IEYPPQVCTM VCNPNPNPNI  120
VASPLSPSRV SAASVQDNCG EHAFISQSFV PPHQKCSFFS SHHTLSVHDI LDLKLERENL  180
RLGEMGCQVK RIMPSSAVNS LDLVGLQSQA ENSVGNEEVS TKRRRTDMSL PLFISPDLGK  240
RRIDTSLPFF IKTSYCDRQQ LQSEVHGLGP SPKEDLDLEL RLGDRPKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.14e-29C2H2 family protein