PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86192.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB
Protein Properties Length: 313aa    MW: 35124.7 Da    PI: 9.6458
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.37.2e-132673247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                      +WT eE +++ +a + + ++   +W ++a++++ g+t ++++s++ ++
       RWR86192.1 26 PNWTHEENKRFENALAVHDKDtpdRWQKVASMIP-GKTIEDVRSHYKDL 73
                     58********************************.***********876 PP
2Myb_DNA-binding43.76.2e-14133177347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + k++G+g+W+ I+r +   Rt+ q+ s+ qky
       RWR86192.1 133 PWTEEEHRLFLMGLKKYGKGDWRNISRNFVMSRTPTQVASHAQKY 177
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MKWEMMEILS PASYSSWFFN EVVKTPNWTH EENKRFENAL AVHDKDTPDR WQKVASMIPG  60
KTIEDVRSHY KDLVDDVSDI EAGLIPIPGY GTCPFTLEWV NGSGFDGLKS PTFAVGGKRS  120
GARPDQERKK GVPWTEEEHR LFLMGLKKYG KGDWRNISRN FVMSRTPTQV ASHAQKYFIR  180
QFSGGKDKRR ASIHDITTVN LTDTKPPSPP QSNTSLRSSS VSAPKISEHF SLFYDPNQPN  240
EGAMALSAAF SQANRNNIIN PTFGITTYGM KLQEQNLLRS MLRETKVCPP PEHRISSTSV  300
TPTPSGIAGT FLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.15e-96MYB family protein