PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86337.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Nin-like
Protein Properties Length: 240aa    MW: 26305.3 Da    PI: 6.7979
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86337.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK46.57.2e-152058341
      RWP-RK  3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGI 41
                +++s+++++k Fs+pi++AA+ Lgvc++vLK+iCR +G+
  RWR86337.1 20 DSLSFNEVAKLFSMPIAEAANILGVCTSVLKKICRDNGL 58
                689*********************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MSETDKSSHQ SDGGSVALND SLSFNEVAKL FSMPIAEAAN ILGVCTSVLK KICRDNGLIS  60
GIQLQNRTPS SVQDSSKSQQ GNIQMAGQAS QQQGNRLLQN GRQNMFQSSQ PKNIPTYLDE  120
FKHGFPTNGL SSVSTKWWGT SGLDGNEMLE EEHLAQEAEK QPSGESVEDM EASKVKTERE  180
TEKGDTGAAL LLSLRKRASE DGRAAVKLGV ARGYGAYKLR RKERAMLLQI FRSSYPSEWE