PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86486.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 258aa    MW: 28262.9 Da    PI: 9.8624
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.4e-1374120354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K++Ka+ L +++  +k+L
  RWR86486.1  74 KNHSEAERRRRERINTHLSTLRSLLPTT-----GKMDKASLLAEVISQVKEL 120
                 58*************************9.....9**********99988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MDSFPWEYGS VCGRVASIDS SENAQNIGLQ STAGRGGLFS SSLVLDSERR ELVKAPARLL  60
QKGIAEAKAK EALKNHSEAE RRRRERINTH LSTLRSLLPT TGKMDKASLL AEVISQVKEL  120
KRHAAEISKG SNVPSDVDEV RVEPDNDGTN KGSFSIKASL SCEDRPELLS DLKETLHALR  180
MKTVRAEISS LGGRVKNVFV MTCEGHVNDV DRRSFASSVH QALKAVLDRV SSTEFSPRTA  240
LPNKRQRISL FDSSSSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18085ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-43bHLH family protein