PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86576.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 286aa MW: 32941.4 Da PI: 5.933

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.2e-07	235	268	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + RWR86576.1 235 KWPYPTEDDKTKLVEETGLQLKQINNWFINQRKR 268 469*****************************87 PP
2	ELK	25.5	3e-09	189	210	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ RWR86576.1 189 ELKVELKQGFRSKIEDVREEIL 210 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MQQEEPGVGI VEMGVVISEE DERRIKAEIA SHPLCEQLLA AHVGCLRVAT PIDQLGLIDA 60 QLAESHHLLR SFQSHHYQIL LSPRDKQDLD HFLEQYLLVL CSFRERLQQH VRVHAVEAVI 120 ACREIEQSFQ ALTGVTLGEG IGSTMSDDED EVQMDCALDM SLDGHDMMGF GPLLPTESER 180 TLMERVRQEL KVELKQGFRS KIEDVREEIL RKRRAGKLPV DTTTVLKDWW QQHAKWPYPT 240 EDDKTKLVEE TGLQLKQINN WFINQRKRNW HSNSQSVTSS TSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	266	286	RKRNWHSNSQSVTSSTSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-141	TALE family protein