PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86629.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 248aa    MW: 26718.7 Da    PI: 4.8626
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86629.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.17.8e-1780129155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+G+r ++ +g+Wv+eIr+p+    + kr++lg+f tae+Aa+a++ a+++l+g
  RWR86629.1  80 PVYRGIR-CR-SGKWVSEIREPR----KaKRIWLGTFATAEMAAAAHDVAALALKG 129
                 68****9.55.6*********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDYPMQQGHQ QPTVPPANAP HAADPHAPGD PYSNRKCMMH EPPQMGPPNN MLQWTHMPEN  60
TSVPHHPRPT QAATSAGKHP VYRGIRCRSG KWVSEIREPR KAKRIWLGTF ATAEMAAAAH  120
DVAALALKGA DAVINFPDSV HSNPVPASNS PSDIRAAAAA AAALRVSKSE EVGAAPDVEL  180
GGDGEENSSS QVQMGFREEF LDEEELYAMP ELMVSMAEGM LLSPPRLNSP ESDDPPESSD  240
GGNLWSYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-32ERF family protein