PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86908.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 249aa    MW: 26408.9 Da    PI: 4.7098
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86908.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-183786255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y GVr+++ +gr+++eIrdp +   + r++lg+f+taeeAa a+++a+++++g
  RWR86908.1 37 RYLGVRRRP-WGRYASEIRDPAT---KERHWLGTFDTAEEAALAYDRAARSIRG 86
                588******.**********843...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDFSNPPTNP SSSSSSSSTP PSDKKTRKKS SQDTPGRYLG VRRRPWGRYA SEIRDPATKE  60
RHWLGTFDTA EEAALAYDRA ARSIRGPRAR TNFAYHDMPP GSSLTSILSP DYYTATNTNL  120
LIPTSATAAS GGGQWIPTPP QEPVFTGVPS GPHLSDDTGL PPFPPAISDV SGCFGSGLSD  180
PVAQLSQAGS SNGQDLFGFP EQGSGYEAGF GIGVDEYLHS PLFGQMPSVS DSVTDVTDGF  240
DLGPSSYFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-33ERF family protein