PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86926.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 239aa    MW: 26791.1 Da    PI: 6.7558
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2681.8e-214998255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f+taeeAa a+++a+++++g
  RWR86926.1 49 RYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEEAALAYDEAALRFKG 98
                7********.**********9...3.35************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MTAMVSALTH VIGTTDMETT PPGSGYPLQV PQSGVAEQSS QEQDPPRRRY RGVRQRPWGK  60
WAAEIRDPNK AARVWLGTFD TAEEAALAYD EAALRFKGAK AKLNFPERVQ GQTHVGFFFD  120
DQSHISPQPQ PQHNHNHNHH CHRHHSANAY LPPHAQSSYS DYLPYAQFLS SKEEDLQYAA  180
AASSLYNYQD YSSMSSSSSD PSQFPSQFGS SASSSSTSDQ TADYGRFMDS SHHPRDYYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.11e-23ERF family protein