PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86975.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 248aa MW: 27918.7 Da PI: 9.8415

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86975.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.2	2.2e-51	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+e+d++k++PwdLp +++e yfFs r+ ky++g+r+nrat sgyWkatg dk++++ +++ RWR86975.1 14 LPPGFRFHPTDEELVVQYLKRKVFSCPLPA-SIIPEIDVCKSDPWDLPG---DSKQERYFFSIREAKYPNGNRPNRATGSGYWKATGLDKQIVAPrSNQ 108 79**************************.89***********3...456799*******************************986777 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk+Lvfy+g+ pkg++tdW+mheyrl RWR86975.1 109 VVGMKKVLVFYRGKPPKGSRTDWIMHEYRL 138 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MEKMNFVRDG VVKLPPGFRF HPTDEELVVQ YLKRKVFSCP LPASIIPEID VCKSDPWDLP 60 GDSKQERYFF SIREAKYPNG NRPNRATGSG YWKATGLDKQ IVAPRSNQVV GMKKVLVFYR 120 GKPPKGSRTD WIMHEYRLSD ATGSRGCIVP QRKNSTQNAM MQMEDWVLCR IFLKKRSAKN 180 DGETTQACTN YRARNLGAPR IGFIDFMGRE TSSSSDSSSI TEISSAGSPN EENSSPNSFS 240 SSPCERKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-87	NAC family protein