PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87050.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 182aa    MW: 20857.2 Da    PI: 9.802
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.27.3e-33103161159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK vk++++prsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H+h+
  RWR87050.1 103 LDDGYRWRKYGQKAVKNNKHPRSYYRCTHQGCNVKKQVQRLSKDEGIVVTTYEGMHTHP 161
                 59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MENYQILFHP SSSSSSLSSS TQLPLLSSNM QNSNVLTNTN GNSNGFWGLK TDVDVPKSDA  60
NNTAPHETFV GSQDEVKQEK KKGEKKVRRP RYAFQTRSHV DILDDGYRWR KYGQKAVKNN  120
KHPRSYYRCT HQGCNVKKQV QRLSKDEGIV VTTYEGMHTH PIEKSTDNFE HILNQMQIYS  180
GF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.12e-56WRKY family protein