PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87125.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 235aa    MW: 26575.9 Da    PI: 10.2778
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.36e-11112152350
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                  +GV++  k+ +W A I++      +k+++lg+ g+ eeAa ++++a+
  RWR87125.1 112 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAA 152
                 69**98..47*********4.....5********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVSIRRRRLL GLCSGRSSFL VPLPRASENG SVSENHIQNA RWPKPFSVHP MPSKDFSQQK  60
QINISEACLG STNPSSSSLL KEEQKQQFSG QEAKHRRRRR RKHFEDQEPC AMRGVYFKNM  120
KWQAAIKVDK KQIHLGTVGS QEEAAHLYDR AAFLCGREPN FELPEEEKQE LLQFKWDEFL  180
TMTRNAITSK KHQRRVGAGT RKKPGTVLQS SDSGGDRAVS DYSASGEAEA DASNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196101RRRRRR
296102RRRRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-35ERF family protein