PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87137.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HSF
Protein Properties Length: 92aa    MW: 9935.22 Da    PI: 5.5754
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87137.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind81.31.5e-252482260
                  HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
  HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60
                  Fl k+ye++ed++++e++sws+ ++sf+v+++ efa+ +Lp+yFkh+nf+SF+RQLn+Y
    RWR87137.1 24 FLLKTYEMVEDPATDEIVSWSSLKTSFIVWNPPEFARVLLPTYFKHNNFSSFIRQLNTY 82
                  9********************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MEGGHSSATS GGGGGGGGGG PAPFLLKTYE MVEDPATDEI VSWSSLKTSF IVWNPPEFAR  60
VLLPTYFKHN NFSSFIRQLN TYVSFSLFLL TI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.14e-31HSF family protein