PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87385.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 384aa MW: 42764.1 Da PI: 5.8546

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.7	3.8e-52	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+k +g ++el evi+ +d+yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nrat++gyWkatgkd+++++ ++ RWR87385.1 6 LPPGFRFHPTDEELVGYYLKRKEDGLEIEL-EVIPVIDLYKSNPWELPdKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATAAGYWKATGKDRKIVC-HS 102 79**************************.99**********96434556788**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++gl+ktLvfy grap+g +tdWvmheyrl RWR87385.1 103 AVTGLRKTLVFYCGRAPSGDRTDWVMHEYRL 133 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MGGMPLPPGF RFHPTDEELV GYYLKRKEDG LEIELEVIPV IDLYKSNPWE LPDKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATAAGYWK ATGKDRKIVC HSAVTGLRKT LVFYCGRAPS 120 GDRTDWVMHE YRLCGDSSQE SSGFEGAFSL CRVIKRSEQG LKIGAFPGEC KTKSVVSSIK 180 KSVTPRILKS KTSRTSEGSP SHSSNLFDGS SDSTPIKSPS QIRSTMEVEP TVTQSHCASS 240 WMTHDLVPDS SEVFLQAGHH ATECLPPNEF QNSVTAWQSC NPIVSLFPSY SMGEDSLIDE 300 LSLMGCMSPY PKPMAYDGVF SNEDTQVQNH IWAECPRDIN PMSDGFEAWN STTSPPICRQ 360 GSGDSSSGEL NGLWSRDDNM LIVM

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MGGMPLPPGF RFHPTDEELV GYYLKRKEDG LEIELEVIPV IDLYKSNPWE LPDKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATAAGYWK ATGKDRKIVC HSAVTGLRKT LVFYCGRAPS  120
GDRTDWVMHE YRLCGDSSQE SSGFEGAFSL CRVIKRSEQG LKIGAFPGEC KTKSVVSSIK  180
KSVTPRILKS KTSRTSEGSP SHSSNLFDGS SDSTPIKSPS QIRSTMEVEP TVTQSHCASS  240
WMTHDLVPDS SEVFLQAGHH ATECLPPNEF QNSVTAWQSC NPIVSLFPSY SMGEDSLIDE  300
LSLMGCMSPY PKPMAYDGVF SNEDTQVQNH IWAECPRDIN PMSDGFEAWN STTSPPICRQ  360
GSGDSSSGEL NGLWSRDDNM LIVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	1e-88	NAC family protein