PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87418.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C3H
Protein Properties Length: 211aa    MW: 24291.6 Da    PI: 8.3693
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.52.7e-0982101626
                 -SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                 C+ f+r G C++Gd+C+FaHg
  RWR87418.1  82 CPEFRR-GGCRRGDSCQFAHG 101
                 ******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MLKAVNQASK PDTKPPQFSN CPGGDGDGDT IYESDEFRMY SFKIRRCTKT RAHSWTECPY  60
AHRGEKAQRR DPRKFNYSAI TCPEFRRGGC RRGDSCQFAH GVFEFWLHPT RYRTLACMAG  120
KYCRRKVCFF AHTPEQMRIG TMAGLCHCIY RICANSPPVA PENEFGKVAD RNLVKGMRDL  180
KKEGDEEKVE RCFGDEMSDF PDIDWISELV S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07500.11e-63C3H family protein