PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87445.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 255aa    MW: 28136.1 Da    PI: 6.8541
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-1884132355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  RWR87445.1  84 YRGVRKRN-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 132
                 9****887.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MEEADFIEHE ANCTTSSSSS SSSSSSASTD LLGLGPNLKI SSESKKKSAH KQLNETNRNG  60
TAHQHQHQHQ QQNNSSNAGK HPMYRGVRKR NWGKWVSEIR EPRKKSRIWL GTFPTAEMAA  120
RAHDVAALAI KGKSAYLNFP ELAKQLPCPA STSPKDIRAA AAKAAATLFN EPMSKKGEQS  180
QFELPLSHSP PQESSSSAST SAEDDYDALF DLPDLIHIAT DFNSSADYFY CSSPWLQDTG  240
FRLEDPFLWD SCYPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.11e-43ERF family protein