PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87460.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 250aa    MW: 27511.5 Da    PI: 5.5981
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.81.4e-18171205135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+C t kTp+WR gp g+k+LCnaCG++y++ +l
  RWR87460.1 171 CSHCATEKTPQWRTGPMGPKSLCNACGVRYKSGRL 205
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MLPDAEMEGA PPVYMYEHHH PSSDLLHIDD LLDFSNEEIF DTSSSDASSH RFPPPLESSL  60
PSSEVPDVTQ FRSQFEDLSI PCEDVEELEW LSNFVEESFS DLPFPAGGGD IARSSSSWAD  120
GRARGKRSRP SGANGGGGCM MEGEFSAESG KGKGGGRRKE AVSGEVGVRK CSHCATEKTP  180
QWRTGPMGPK SLCNACGVRY KSGRLVPEYR PAASPTFVLT QHSNSHRKVM ELRRQKEVLR  240
QDSFHDFKVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.14e-57GATA family protein