PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87467.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 458aa    MW: 49685.5 Da    PI: 6.6425
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.0002383100219
                 EETTTTEEESSHHHHHHH CS
     zf-C2H2   2 kCpdCgksFsrksnLkrH 19 
                 +C++Cgk Fs++ ++  H
  RWR87467.1  83 SCENCGKEFSSWKSFFEH 100
                 6**************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    
MAVDMDQQQS FKHFCRICKK GFGCGRALGG HMRAHGIGDE AGHVYDDDPA ADWDDKLTGN  60
ASASNKRMYA LRTNPNRFKS CRSCENCGKE FSSWKSFFEH GKCSSDDAES LVSSPGWEEG  120
DDGRLGCGGG GWSKGKRTRR VTVAAGGSIS PCPSSEEEDL ANCLVMLSTA RVDPLVVETE  180
ESCASADKDE ERRHPNFSGI VAIADRAAAA DKAKGVSRGL FECKACKKVF NSHQALGGHR  240
ASHKKVKGCF AAKLNDLDEG MVEEEVITHD DFSIQPKVLP LTLDHHDISI ISAKKKSRVH  300
ECSICHRIFP SGQALGGHKR CHWVTSNSPE SCSVGKFQQL PQRPTFNKSE PLDLNLPAPI  360
DDPTGVKQDN QSSLQLQLPT GIYLQQWSGV VYPNDTMKEK NNDNSNIIAS SSLHLDEEGD  420
GKVKLAKLSD LKDMNLGGES SPWLQVGIGS AANGINDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.12e-28C2H2 family protein