PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87482.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 779aa    MW: 83928.9 Da    PI: 6.2039
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS325.97.9e-1004217782374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 v+lL+++Ae+v++g+   aq++Larl+++ sp g+p+qR+a+yf+eAL+  l+     +   l++s +s+ +++ +++a+k+fse+sP+l+f ++t+Nq
  RWR87482.1 421 VDLLFKAAEVVQAGNSIIAQEILARLNHQLSPVGKPLQRAAFYFKEALQLLLNT----TNYPLASS-ASPLDVVFKISAYKVFSEISPFLQFVNFTTNQ 514
                 689**************************************************9....33333333.344679************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl....eleeLr 195
                 a lea+eg++r+Hi+Dfdi+ G+QW++++q+L +R++g  sl+iT+++s +s++  el+ t+e+L++fA+ l+++f+fnv+  ++++       +  L+
  RWR87482.1 515 AFLEALEGCDRIHIVDFDIGIGGQWASFMQELVARRGGVNSLKITAFSSFSSHHPLELKLTRENLTHFANDLNISFQFNVINLDSIDLStalsLPTILN 613
                 ********************************************************************************9666666551121345569 PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 ++ gE++aVn+ +   + l          + +L+ vk++sP +vv ++  +++++ +F +++l+al+ ys+lf sl+a    +s++ +k+E++ll+++i
  RWR87482.1 614 ISDGESVAVNFPVGSSNPL---------APLLLRSVKQISPMIVVSIDLGCERSDLPFSQHILHALQSYSVLFHSLDAV-NVNSDAVRKIEKFLLRPRI 702
                 999**********777766.........468*********************************************665.5799*************** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++v  ++++     e+l  Wr+ + +aGF+p++ls+++++qa++++++ +++g++ve+ ++sl+l+W+  +LvsvSaWr
  RWR87482.1 703 ESAVLGRHRA----GEKLPPWRSLFASAGFSPLALSNFTEMQAEYMVNRLPVRGFHVEKCQASLYLCWQCGELVSVSAWR 778
                 *****99998....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 779 aa     Download sequence    
MRAVPFHLQG KGVLDLGVEA EISGGRAGKR KREGSCGSTE PTSVLERRRS PSPPTSTSTL  60
SASLGGGSSG STDTAGVAAV SGNPTLNKWP PTQEGCSGAD AGRKEEWALE LQPIPMGSAG  120
ERCSGAGGAG GGMDELESML TESAASPGNE QSFFRWFMGD MDDPSLKQLL QSGGSSEFES  180
GGNGFGVVDS GLGYGGGVSS PENVDASPMN PPPLLAAASA GSDFGLSCNN MSNRLLVSSP  240
NHPSHLLPSS KGSCFGSSSN SNSNPSNPIM SAAANNHLSL PISLPQGGFY QQMEAIDEKP  300
QLFNPQLVLN QQQVQSVQNP ALLLPFPYIQ QEQQLLPPQP KRHHPTAIFD PSCQFAKTPP  360
FADFGQEMFL QQQQLPQSIS NEHPIPNHLQ QRPPQMVKSK VVVGAGDNAN HQLLQQQQTF  420
VDLLFKAAEV VQAGNSIIAQ EILARLNHQL SPVGKPLQRA AFYFKEALQL LLNTTNYPLA  480
SSASPLDVVF KISAYKVFSE ISPFLQFVNF TTNQAFLEAL EGCDRIHIVD FDIGIGGQWA  540
SFMQELVARR GGVNSLKITA FSSFSSHHPL ELKLTRENLT HFANDLNISF QFNVINLDSI  600
DLSTALSLPT ILNISDGESV AVNFPVGSSN PLAPLLLRSV KQISPMIVVS IDLGCERSDL  660
PFSQHILHAL QSYSVLFHSL DAVNVNSDAV RKIEKFLLRP RIESAVLGRH RAGEKLPPWR  720
SLFASAGFSP LALSNFTEMQ AEYMVNRLPV RGFHVEKCQA SLYLCWQCGE LVSVSAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-122GRAS family protein