PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87502.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family YABBY
Protein Properties Length: 210aa    MW: 23159.4 Da    PI: 7.5037
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY2206.9e-68101742170
       YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100
                 d+   seq+CyvqCnfC+t+lavsvP +slfk+vtvrCGhCt+llsvn++ +    a + ++++s+  + ++ l+       s    + ++s sv    
  RWR87502.1  10 DHLPPSEQLCYVQCNFCDTVLAVSVPCSSLFKTVTVRCGHCTNLLSVNMRGMLLPAANQLNFGHSFFSPSHNLLEEVPAPPPSLLLDHCNPSDSV---- 104
                 577899****************************************8887776666666666788888777766666666666655555554443.... PP

       YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                 +s+ +++e p+vp ++rPPekrqrvPsaynrfik+eiqrika+nPdi+hreafsaaaknWahfP+i fgl
  RWR87502.1 105 ISTVRSDEPPKVPAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHINFGL 174
                 4567888999**********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MSSSSAFSLD HLPPSEQLCY VQCNFCDTVL AVSVPCSSLF KTVTVRCGHC TNLLSVNMRG  60
MLLPAANQLN FGHSFFSPSH NLLEEVPAPP PSLLLDHCNP SDSVISTVRS DEPPKVPAIN  120
RPPEKRQRVP SAYNRFIKDE IQRIKAGNPD ITHREAFSAA AKNWAHFPHI NFGLLPDQAV  180
KKTSVRQQEG EDVLLKDGFF STANMGVTPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-88YABBY family protein