PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87725.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Protein Properties

Length: 352aa MW: 39230.5 Da PI: 9.5594

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	95.9	2.7e-30	75	165	1	86
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.g 86 f+kv tpsdv+k++rlv+pk++ae++ ++e++ l +ed+sg+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g RWR87725.1 75 FDKVVTPSDVGKLNRLVIPKQYAEKYfpvdwT-VNEKGLLLNFEDRSGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGvG 165 89*************************963.4567889**********************************************5424 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MEFHFVPGRE GYFEEEEGKQ MLGDLGKGEF HLSPPSSSSA TSPSSSSQYK GMVPQQLNGG 60 EAERCSWVGE KEHMFDKVVT PSDVGKLNRL VIPKQYAEKY FPVDWTVNEK GLLLNFEDRS 120 GKPWRFRYSY WNSSQSYVMT KGWSRFVKEK KLDAGDIVSF QRGVGELGKD RFYIDWKHRP 180 NTRVDPLHRT VPLGRYFMPL SFPHLHLQQL NCSADHVNYY GVNGYNVTNP GGSLFYLHSA 240 GAVQMGSGGE RSLASPMAID GVQAVHKKAA SKRLRLFGVN LDCPTSTTAG NSGDGSLFTP 300 SVRTPQAITM IPPYPPLQPP LKTRLFNGIP LPVAPSQLSR KGKQPLSLDL DL

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MEFHFVPGRE GYFEEEEGKQ MLGDLGKGEF HLSPPSSSSA TSPSSSSQYK GMVPQQLNGG  60
EAERCSWVGE KEHMFDKVVT PSDVGKLNRL VIPKQYAEKY FPVDWTVNEK GLLLNFEDRS  120
GKPWRFRYSY WNSSQSYVMT KGWSRFVKEK KLDAGDIVSF QRGVGELGKD RFYIDWKHRP  180
NTRVDPLHRT VPLGRYFMPL SFPHLHLQQL NCSADHVNYY GVNGYNVTNP GGSLFYLHSA  240
GAVQMGSGGE RSLASPMAID GVQAVHKKAA SKRLRLFGVN LDCPTSTTAG NSGDGSLFTP  300
SVRTPQAITM IPPYPPLQPP LKTRLFNGIP LPVAPSQLSR KGKQPLSLDL DL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	8e-67	B3 family protein