PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87852.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 287aa MW: 32983.2 Da PI: 6.3011

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.2e-07	236	269	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + RWR87852.1 236 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 269 469*****************************87 PP
2	ELK	25.2	3.8e-09	190	211	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ RWR87852.1 190 ELKIELKQGFRSKIEDVREEIL 211 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MQQEEGLGLV GGDMLRMVEE ASFDQTKSEI VNHPIFEQLL AAHVGCLRIA TPIDHLPLID 60 AQIAQSHHLI RSYQSNHHHQ ILPPHEKQDL DNFLAQYLLL LCSFKEQLHQ HVQVHAVEAV 120 LGCRDIEQSF HALTGVTLGE GTGATMSDDE DDMQMEYSFD NNTDGHDLMG FGPLLPTDAE 180 RSLMERVRQE LKIELKQGFR SKIEDVREEI LRKRRAGKLP GDTTSVLKDW WQQHAKWPYP 240 TEDDKAKLVE ETGLQLKQIN NWFINQRKRN WHSNSQSGST LKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	287	RKRNWHSNSQSGSTLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-141	TALE family protein