PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87878.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 243aa    MW: 27468.1 Da    PI: 7.7013
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87878.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.2e-1076128155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +++ h  +Er+RR+++ + +  Lr++lP       ++K s ++   +A +YI++L+
  RWR87878.1  76 KKTVHRDVERQRRQEMSTLYMLLRSHLPLeY---LKGKKSISDHMCEAANYINHLK 128
                 6899*************************77...9*******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MDYVAPQNLY FQQGDDLCFQ TTHPHHNHII QGMLTNHPPM SVDSSHELLQ KGKPKKLGEP  60
ITHDAKGDES HTNKKKKTVH RDVERQRRQE MSTLYMLLRS HLPLEYLKGK KSISDHMCEA  120
ANYINHLKAK IEELTEKRDQ MRRLITSSSN SRSPQNEARP LSPDISLRAT SNGATVLIVD  180
RSGHELPLSR VIAALEEEGL NVISVSTCMN TQSVYNIECE SNGPRVDSSG LEQKLRDSIC  240
LAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-29bHLH family protein