PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87929.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bZIP

Protein Properties

Length: 433aa MW: 47128.9 Da PI: 5.2027

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.1	2.9e-16	223	279	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + kr+rr+ +NRe+ArrsR+RK+a + eLe+ v++L eN++L k+l ++++ + RWR87929.1 223 DAKRARRMLSNRESARRSRRRKQAHLSELEQQVAQLRFENSSLLKRLTDVSQKYNEA 279 68******************************************9999998888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MDRVFSVEEI SDPFWLSSHF SSSAAAAAAA ADESSNNNNN YNNNKMNRSS SEWAFQRFLE 60 EASISQNNPS QSLSSTSSSL NEKPIEIKDP PISDPSLNDN GPIDPEEYQQ ILKKRLDLAC 120 AAVALSWSSG VKPPEFSPLA NSGSQASSTS QLGSQTHGSP YSLPRTQEKA VGGPIGIPAL 180 PMIQKSSGIQ NIPATSGSSK EEHSADDEIE GETETAEHMD PADAKRARRM LSNRESARRS 240 RRRKQAHLSE LEQQVAQLRF ENSSLLKRLT DVSQKYNEAA VDNRVLKADV ETLRAKVKMA 300 EDTVKRVTGV NTLIQTMSDA SSISMPYSSS PSDGTTDAAV PVQENPNQFF LATHEQGMTT 360 GIPDIAHVPV EDMHNGGSKM GRTASMQRVA SLEHLQKRIR GGANPCEPPM HWDGVWSPEI 420 SHADETSNTQ NQV

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MDRVFSVEEI SDPFWLSSHF SSSAAAAAAA ADESSNNNNN YNNNKMNRSS SEWAFQRFLE  60
EASISQNNPS QSLSSTSSSL NEKPIEIKDP PISDPSLNDN GPIDPEEYQQ ILKKRLDLAC  120
AAVALSWSSG VKPPEFSPLA NSGSQASSTS QLGSQTHGSP YSLPRTQEKA VGGPIGIPAL  180
PMIQKSSGIQ NIPATSGSSK EEHSADDEIE GETETAEHMD PADAKRARRM LSNRESARRS  240
RRRKQAHLSE LEQQVAQLRF ENSSLLKRLT DVSQKYNEAA VDNRVLKADV ETLRAKVKMA  300
EDTVKRVTGV NTLIQTMSDA SSISMPYSSS PSDGTTDAAV PVQENPNQFF LATHEQGMTT  360
GIPDIAHVPV EDMHNGGSKM GRTASMQRVA SLEHLQKRIR GGANPCEPPM HWDGVWSPEI  420
SHADETSNTQ NQV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	245	RRSRRRKQ
2	240	245	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	3e-56	bZIP family protein