PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87956.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family LBD
Protein Properties Length: 125aa    MW: 13638.6 Da    PI: 6.6701
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26044.35.1e-1425734695
      DUF260 46 lkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
                lk+lp ++r  a+ss+vyeA+ar+r PvyG+vg i +lq+q++ l+ +la
  RWR87956.1 25 LKELPMHQR-SAVSSMVYEANARVRAPVYGCVGAIASLQEQVDVLQPQLA 73
                667666665.689*******************************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MLQSTLEKNL FDLINFLFQP FHLSLKELPM HQRSAVSSMV YEANARVRAP VYGCVGAIAS  60
LQEQVDVLQP QLAVGTGMSR GGAHEDVACL AGNFVESGSP SSKLTTHSHS RSLFAMDMVF  120
DQPNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.12e-19LBD family protein