PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR88435.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 208aa    MW: 22537.2 Da    PI: 9.5594
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR88435.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.94e-211968255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  RWR88435.1 19 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 68
                6********.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MAMKDKVKSK GGERGGEVHY RGVRKRPWGR YAAEIRDPGK KSRVWLGTFD TAEEAARAYD  60
AAAREFRGTK AKTNFPIISE PQHQSPSQSS TVESSSRGDA PPPAPLLPPA KALDLFPGVG  120
ERFPFRNPAG SVPDLPVFYF DKIVGQRFRY PPAAAAADYH PLAGVCGGGG VQSESDSSSA  180
VVDYHPTPQT RRGVFDLDLN QPPPPEFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-22ERF family protein