PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR88472.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 73aa    MW: 8247.89 Da    PI: 4.0944
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR88472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.21.4e-112666345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      ++++E+ l+ + +++lG + W++Ia +++ gRt++++  +w 
       RWR88472.1 26 EFSEDEETLIERMFNLLGER-WSLIAGRIP-GRTAEEVEKYWT 66
                     69******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 73 aa     Download sequence    
MADLKHSSDD VSDDSLGGSS QDSKAEFSED EETLIERMFN LLGERWSLIA GRIPGRTAEE  60
VEKYWTSRYS TSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.18e-17MYB_related family protein