PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR88877.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

FAR1

Protein Properties

Length: 846aa MW: 96253.9 Da PI: 7.4027

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR88877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.6	1.6e-26	143	238	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 fY++YAk++GF vr+s+ + sk nge ++r+fvCs++g r+ ++++ k++r+r ++rtgC+a+++v+k++ +gkw++ k++++HnH+l RWR88877.1 143 FYKAYAKHMGFVVRTSSFYCSKLNGERISREFVCSRQGLRKINETRnvndttnGGKKKRKRFTKRTGCTAMITVRKQEaSGKWVIVKFRKDHNHPL 238 9**************************************998888999988789999***************9*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 846 aa Download sequence
MLSWMTAPQM KETDWKSTIL GLEDETAECC PSLDISRVGD DNVALGHGRV GDDDILLEHP 60 HVGDVDNLIV NPRVGDDSIL MENPGVDDDD IAMESPNVGD DNTAVENPCV GDVIVAGENH 120 AVEELVEPAV GMEFASEDEA KVFYKAYAKH MGFVVRTSSF YCSKLNGERI SREFVCSRQG 180 LRKINETRNV NDTTNGGKKK RKRFTKRTGC TAMITVRKQE ASGKWVIVKF RKDHNHPLLG 240 SNEVLTPSPR PPKTAKSSKN RGREKGKKVR KATPVSKEDC GQPSNVSVDD NTSINKVAKV 300 RRWYFGNETQ NILGYFKRRQ ANDPGFFYAV EVDEKQCLSR VFWVDGRSRM AYEHFGDVVT 360 FDTSYRSNRF QVPFAPFIGV NHHLQPVSFG CALLGDENIS TFVWLFKTWL TAMNERHPVS 420 LITDRDKAVR TAVSNVFPEV HHRFCLLQIN KKRNAKLPHA VNAHPHFQMD FDRCIHRAET 480 IEEFESCWDA LLVKYMLTEN EWFKSLYEDR RQWVSVYLRD KFFADLSTEQ RGDPFFDVRV 540 NEQTSLHDFL MRYERELNDR YEKEAHEDYL PIDTSPMLCT RSPIEKQAAS IYTRKVFNIF 600 QEELLEECNY SVNKIDDDGA TSTYRVARFQ QEYKGWSVTF NVSDMKTNCS CKKFEFSGIL 660 CCHILAVFRV ANVFTIPLHY ILKRWTKNAK SGGDSDKSVI DAQATHHQVM LLRYNILCRE 720 ALRCVENTTL SLDVFNAAMD ALREAARNTA AAKEIITIVE NVGTMVNGTY MENASVVREE 780 NVAEDQVASH DPKSSKAKGQ TPNRKSKSMC SLCKGPKHNI RSCPAKAQST PEDSTPMVLR 840 SRVARS

Sequence ? help Back to Top

Protein Sequence Length: 846 aa Download sequence

MLSWMTAPQM KETDWKSTIL GLEDETAECC PSLDISRVGD DNVALGHGRV GDDDILLEHP  60
HVGDVDNLIV NPRVGDDSIL MENPGVDDDD IAMESPNVGD DNTAVENPCV GDVIVAGENH  120
AVEELVEPAV GMEFASEDEA KVFYKAYAKH MGFVVRTSSF YCSKLNGERI SREFVCSRQG  180
LRKINETRNV NDTTNGGKKK RKRFTKRTGC TAMITVRKQE ASGKWVIVKF RKDHNHPLLG  240
SNEVLTPSPR PPKTAKSSKN RGREKGKKVR KATPVSKEDC GQPSNVSVDD NTSINKVAKV  300
RRWYFGNETQ NILGYFKRRQ ANDPGFFYAV EVDEKQCLSR VFWVDGRSRM AYEHFGDVVT  360
FDTSYRSNRF QVPFAPFIGV NHHLQPVSFG CALLGDENIS TFVWLFKTWL TAMNERHPVS  420
LITDRDKAVR TAVSNVFPEV HHRFCLLQIN KKRNAKLPHA VNAHPHFQMD FDRCIHRAET  480
IEEFESCWDA LLVKYMLTEN EWFKSLYEDR RQWVSVYLRD KFFADLSTEQ RGDPFFDVRV  540
NEQTSLHDFL MRYERELNDR YEKEAHEDYL PIDTSPMLCT RSPIEKQAAS IYTRKVFNIF  600
QEELLEECNY SVNKIDDDGA TSTYRVARFQ QEYKGWSVTF NVSDMKTNCS CKKFEFSGIL  660
CCHILAVFRV ANVFTIPLHY ILKRWTKNAK SGGDSDKSVI DAQATHHQVM LLRYNILCRE  720
ALRCVENTTL SLDVFNAAMD ALREAARNTA AAKEIITIVE NVGTMVNGTY MENASVVREE  780
NVAEDQVASH DPKSSKAKGQ TPNRKSKSMC SLCKGPKHNI RSCPAKAQST PEDSTPMVLR  840
SRVARS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-176	FAR1 family protein