PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89235.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 297aa    MW: 33211.8 Da    PI: 10.084
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.74.2e-1521105187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 +W++  + +Liea  ++  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++++ l+k+yk +k+++++       t+p+f++l+a
  RWR89235.1  21 CWSEAATFTLIEAWGDRYLELNRGNLRQKHWQEVADAVnarhgAVKKQRRTDVQCKNRIDTLKKKYKIEKARASS-------TWPFFSRLDA 105
                 7*************************************976655566689******************9999886.......7******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MDGKETAMTL GARPLPIRED CWSEAATFTL IEAWGDRYLE LNRGNLRQKH WQEVADAVNA  60
RHGAVKKQRR TDVQCKNRID TLKKKYKIEK ARASSTWPFF SRLDALIGTA SVSKKPSPPP  120
PHPPLALPLP LRKIPPSLPQ AAAVRPTKVK RERSPSPDAV PVDDSFFRRN YSAAAAAAAA  180
ATADADSGAS RSSTEIRRKN EDDHDDEDDD GGGGDGFRLL ARAITRFGEI YERVEGAKQQ  240
QMIELEKQRM EFAKGLEFQR MQLFMDSQVQ LEKIKRAKRS SAGGMIHYLL FSHCLIG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.16e-61Trihelix family protein