PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89281.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 256aa MW: 28626.4 Da PI: 5.3849

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89281.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.2	2.9e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G+ +W++I++ g+ R++k+c++rw +yl RWR89281.1 14 KGPWTAEEDKKLINFILTNGPCCWRAIPKLAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	51.9	1.7e-16	70	111	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ RWR89281.1 70 LTDAEEQLVIDLHALLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 5899*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MGRQPCCDKL RVKKGPWTAE EDKKLINFIL TNGPCCWRAI PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGLL TDAEEQLVID LHALLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLIKMG 120 IDPATHQPIH KQSSQETASS STVTMPQCDN SHPNQLPVTD IHIPADDENS SPLENCSSSE 180 WNCLEEKNEE DALMSCLFGD EATLIDSSWT FPSGSGDCNN VGTSGWEQKN AWFLDCQEIG 240 FEELGLGCLE LEGVAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	1e-90	MYB family protein