PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89335.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TCP

Protein Properties

Length: 320aa MW: 34047.4 Da PI: 5.4395

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111	1.7e-34	79	150	4	74
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.e 74 ++ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl a+p+i+++tgt++++a ++ RWR89335.1 79 TRRVSKDRHTKVEGRGRRIRMPAVCAARIFQLTRELGHKSDGETIRWLLDHAEPSIIAATGTGTIPAIATtI 150 67889*********************************************************9999955532 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MEDDRETDQR MNGDKEEEGE EEAISPVPLD STAPPTILPL PSSVPSSTPQ DQQLVYLKPE 60 PLVEDRRLEC VDVKKTLATR RVSKDRHTKV EGRGRRIRMP AVCAARIFQL TRELGHKSDG 120 ETIRWLLDHA EPSIIAATGT GTIPAIATTI DGTLKIPTQS PAYEDGGDGP RKRRRRTEPD 180 GTVSSGLAPI RPTTTSVAEN VVPIWAIGGG GNVISNMNMN TQTFLMLPPS AFAAAAGTSN 240 QMWTFPAHGL PIVDMSGRPI STVGLNLATA VQVQAPPPPV ANGTSLSAAD VGGKQELQLM 300 GGSMNQQSVV TPSNPSNPGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	175	RKRRR
2	171	177	RKRRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	2e-36	TCP family protein