PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89346.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 216aa    MW: 22843.4 Da    PI: 6.3566
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.4e-1658106255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+  ++++g+Wv eIr+p   gk++r++lg+f tae+Aa+a++ a+ +l+g
  RWR89346.1  58 SYRGI--RPRNGKWVTEIREP---GKSTRIWLGTFPTAEMAAAAYDVAAYALKG 106
                 79***..699**********8...557***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MHSHGRGNSA RATCRPTTLG PTTLSAPALP THTSQTPPPS PRPTAATSST TRGGKHPSYR  60
GIRPRNGKWV TEIREPGKST RIWLGTFPTA EMAAAAYDVA AYALKGKDAV LNFPESVHSN  120
PVPTSTSPSA IQAASAAAAA ARLPKRPGEE ITWSESCDQT MGGGEEFMDE EALFAMPKLL  180
ESMAEGMLLS PPRINSTGSD EDSPDYSDGE SLWSYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-36ERF family protein