PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89347.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 212aa    MW: 22597.2 Da    PI: 4.4488
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.42.3e-1554103155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+G+r  +++g+Wv+eIr+p+    +  r++lg+f  ae+Aa+a++aa+++l+g
  RWR89347.1  54 PVYHGIR--SRNGKWVSEIREPR----KaSRIWLGTFPAAEMAAAAYDAAALALKG 103
                 5799995..779*********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MVMDDDNQVS HVGQQGNQPQ TAPPANVRLV EESLRQSFPA QAAATSSAIA GKHPVYHGIR  60
SRNGKWVSEI REPRKASRIW LGTFPAAEMA AAAYDAAALA LKGKDAVLNF PDSVPSNPLP  120
DSNSPSEIQA ASAAAAAARL PKRTGEEMVW AESGDPPTGV GEEFMDEEAL FAMPKLLENM  180
AEGMLMSPPR LNPPESKDSP DNSDGESLWS YG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.18e-39ERF family protein