PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89348.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 216aa    MW: 23153.5 Da    PI: 5.0673
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.73.8e-1558106255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+  ++++g+Wv eIr+p   gk++r++lg+f tae+Aa a++ a+ +l+g
  RWR89348.1  58 FYHGI--RPRNGKWVTEIREP---GKSTRIWLGTFPTAEMAAVAYDVAAYALKG 106
                 68999..699**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MHSQDDETSH VPSGDQRTPA PPPYMHQPIP THTSENPLPS PRPTAATSST TRGGKHPFYH  60
GIRPRNGKWV TEIREPGKST RIWLGTFPTA EMAAVAYDVA AYALKGADAL LNFPDSVHSN  120
PVPASSSPSA IQEASAAAAA ARLPKRPGEE ITWSDRGDHP TGGGDEFVDE EALFAMPKLL  180
ESMAEGMLLS PPRLNSTGSD EDSPDYSHGE SLWSYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-33ERF family protein