PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89349.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 260aa    MW: 28211.2 Da    PI: 6.1654
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89349.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-16103151255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+  ++++g+Wv+eIr+p+    +  r++lg+f tae+Aa+a++ a+++l+g
  RWR89349.1 103 IYRGI--RPRSGKWVSEIREPR----KaSRIWLGTFPTAEMAAAAYDVAALALKG 151
                 69***..699**********94....36***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MVRMHLPPPL TLLGSLFISI SFGLLVIRPL HCLLFPFYKC ILMDMDMDED DGEPTSRVHL  60
LHQLPAAPPA NVRHSDQSLR PFPTHKKLER AATTSTRSGK HPIYRGIRPR SGKWVSEIRE  120
PRKASRIWLG TFPTAEMAAA AYDVAALALK GGDAVLNFPG SVSSNPIPAS TSPSEIRAAS  180
VAAAAARLPK KGGDETVSAE SSVQLAGEGD EFVDEEALFA MPKLLENMAE GMLLSPPRLN  240
SPESDDSPDN SDGESLWSYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-39ERF family protein