PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89350.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 226aa    MW: 24360.5 Da    PI: 10.1255
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.5e-1670119155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+G+r  ++rg+Wv+eIr+p+    +  r++lg+f tae+Aa+a++ a+++l+g
  RWR89350.1  70 PVYRGIR--SRRGKWVSEIREPR----KaSRIWLGTFLTAEMAAAAYDVAALALKG 119
                 68****6..679*********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MEVDEPASHV RQRDRPNRAS PANVRHAKPL LPAPEGWAVG PIANMRPVFH PPFPTAAATS  60
RNRGRKTKHP VYRGIRSRRG KWVSEIREPR KASRIWLGTF LTAEMAAAAY DVAALALKGA  120
DAALNFPDSV SSNPVPASAS PSEIQAASAV AAAARVPKGV GEEMVWAERG NRRPTGGEED  180
FVDEEALFAL PKLLENMAEG MLLSPPRLNS PDSPDNSNGV SLWSYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-27ERF family protein