PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89352.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 262aa    MW: 28146.9 Da    PI: 5.3388
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89352.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2521.7e-16103152155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+G+r  +++g+Wv+eIr+p+    +  r++lg+f tae+Aa+a++ a+++l+g
  RWR89352.1 103 PVYRGIR--SRSGKWVSEIREPR----KaSRIWLGTFPTAEMAAAAYDVAALSLKG 152
                 68****6..678*********94....36************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MDDQPSHVRQ GDQPPTSPSS NVRHVDPEPI RNYQTRPFPF LYQDDPYSHV PIGDQRFVGP  60
AANLRQVDAQ QQQSSSQAHT WENPPPLSPS AAASSSPRAG KHPVYRGIRS RSGKWVSEIR  120
EPRKASRIWL GTFPTAEMAA AAYDVAALSL KGGDAVLNFP DSVHHNPIPA STSPSEIRAA  180
AAAAAAARLQ KQGGQKDAAS EESSERPVGG GDEFVDEEAL FAMPKLLENM AEGMLLSPPR  240
LNSTGSDESP GNSDGESLWS YG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-41ERF family protein