PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89403.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 252aa MW: 28533.8 Da PI: 7.4536

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.6	1.9e-07	85	130	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + Er+RRd++++ +e L +llP+ +K +K +i++ A + +Lq RWR89403.1 85 HMIKERQRRDKMRQNYEGLFSLLPPG-----TKADKNTIVQTAASQVLELQ 130 7789********************97.....79999999999988777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MDFFFQQEFQ AEMLWPEIPE IYIPNDPPRL TAFAPYSRPS DGFSMENSIS PSSHHGNLNK 60 RMIEILGAIR TAAIADKEPL SGYRHMIKER QRRDKMRQNY EGLFSLLPPG TKADKNTIVQ 120 TAASQVLELQ CLKAELQSRN VELEARLAKK AEKGEGAKIN VKVVHPSSAM DSMVEVLKCL 180 RNMEVKAKSI RSVISAEEFS ATVEIESKLQ KSEVENAVKC TLMEVERKKL SRCFAEATDN 240 KSVAIWDLWE GQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	1e-29	bHLH family protein