PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89423.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 270aa    MW: 30550.2 Da    PI: 5.9076
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.8e-1099150255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +  h  +Er+RR+++   ++ Lr+llP       ++K s ++   +A +YIk+ q
  RWR89423.1  99 KIIHRDVERQRRHEMAMLYSSLRSLLPIeY---LKGKRSISDHMNEAANYIKHQQ 150
                 56699***********************77...9*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MVDSRGDIPK PLESMNYVAP SFHFQQGDEM YFQNSISLLQ QQQQQQQAIQ DMFVVCPSVG  60
VEDRHPAVKV PTAQRRNMGA PVPINEDPTD DTRNNKKRKI IHRDVERQRR HEMAMLYSSL  120
RSLLPIEYLK GKRSISDHMN EAANYIKHQQ KKIKEMTERR DALRRIVLPP SLDPAALHMN  180
GDFPAPSVAV APCLVGVEVM IGSGSLLDGV PLAMVIQVLE EEEGLPVLSC VFTNVNEQLI  240
YTLQCQIDDQ RELDLPGLQQ KLMDLILPSC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197110KRKIIHRDVERQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-44bHLH family protein