PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89440.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 296aa MW: 33834.5 Da PI: 6.3929

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.9	7.2e-08	245	278	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + RWR89440.1 245 KWPYPTEEDKAKLVEETGLQLKQINNWFINQRKR 278 469*****************************87 PP
2	ELK	25.1	4e-09	199	220	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ RWR89440.1 199 ELKIELKQGFRSKIEDVREEIL 220 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MQHETEAGME MGMMGGGGGM LLRACDEATA EEQRQMKTEI ASHPLCEQLL AAHVGCLRVA 60 TPIDHLPLID AQLSQSHHLI RSYQSQHHLL LSPHDKQDID NFLSQYLLVL CSFKDQLQQH 120 VRLHAVEAVM ACREIEQSFQ ALTGLTLGEG TGATMSDDED ELQMDNALDM SMDGHDMMGF 180 GPLLPTESER TLMERVRQEL KIELKQGFRS KIEDVREEIL RKRRAGKLPG DTTSVLKNWW 240 QQHAKWPYPT EEDKAKLVEE TGLQLKQINN WFINQRKRNW HSNSQSVTSL KSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	296	RKRNWHSNSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-147	TALE family protein