PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89524.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Protein Properties

Length: 367aa MW: 40849.3 Da PI: 10.0998

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	100.8	8e-32	87	190	1	98
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 f+kv tpsdv+k++rlv+pk++ae++ + +e++ l +ed+sg+sW+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ + +l+ RWR89524.1 87 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSTANEKGLLLNFEDRSGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLNAGDIVSFERGvGElAKDRLY 185 89*************************9445568889**********************************************554766677677 PP EEEE- CS B3 94 vkvfr 98 + + r RWR89524.1 186 IDWKR 190 76666 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MEKKVMLGDM GMLHPFRFSP SSSSTPSWYK GVANHPSSQW ATQIYDQAAF KLHSGDHITN 60 FNGMGFREGG GEGDFKAGEN VEREHMFDKV VTPSDVGKLN RLVIPKQHAE KYFPLDSTAN 120 EKGLLLNFED RSGKSWRFRY SYWNSSQSYV MTKGWSRFVK EKKLNAGDIV SFERGVGELA 180 KDRLYIDWKR RTNMVATVAQ AEFQLPRCPW GRSFLMPASS SHTHMSLQQQ LNFGRWRCAG 240 GHSHSYNGVS PGPVIYRGQG GPQGVVGGVR NEVLPMGFSS VPVVPGNLVA AKRLRLFGVN 300 LESPTTEDAE GDFLSSTMSQ TRVSSLSPQT PSLPSLQLRL FNGTPLPLGL EELPKKRKSS 360 LSLELNI

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MEKKVMLGDM GMLHPFRFSP SSSSTPSWYK GVANHPSSQW ATQIYDQAAF KLHSGDHITN  60
FNGMGFREGG GEGDFKAGEN VEREHMFDKV VTPSDVGKLN RLVIPKQHAE KYFPLDSTAN  120
EKGLLLNFED RSGKSWRFRY SYWNSSQSYV MTKGWSRFVK EKKLNAGDIV SFERGVGELA  180
KDRLYIDWKR RTNMVATVAQ AEFQLPRCPW GRSFLMPASS SHTHMSLQQQ LNFGRWRCAG  240
GHSHSYNGVS PGPVIYRGQG GPQGVVGGVR NEVLPMGFSS VPVVPGNLVA AKRLRLFGVN  300
LESPTTEDAE GDFLSSTMSQ TRVSSLSPQT PSLPSLQLRL FNGTPLPLGL EELPKKRKSS  360
LSLELNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	4e-66	B3 family protein