PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89609.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 280aa MW: 31237.1 Da PI: 8.6465

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	108.4	8.6e-34	50	190	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWka 85 lp+G++F+Ptd el+ e+L+ kv+++ ++l+ +++ +i++++P++Lp vk++ +fF++ +k+y+tg+rk+r+++ + +W++ RWR89609.1 50 LPAGVKFDPTDTELL-EHLEGKVRSDAHKLHPlidefipTLEGEnGICYTHPEKLP-GVKKDGLVRHFFHRPSKAYTTGTRKRRKVHtdahggETRWHK 146 799**********.99**9995553333333222333336******.666777788**************744445555778* PP NAM 86 tgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 tgk+++v++ +g+++g kk+Lv+y g+++k+ekt+Wvmh+y+l RWR89609.1 147 TGKTRPVFV-SGKVKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 190 *******.999*******6657999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MTWTNGCDED RAATAGGGDK CKEIRIKSCP SCGHRIQCHD QAAIHELPGL PAGVKFDPTD 60 TELLEHLEGK VRSDAHKLHP LIDEFIPTLE GENGICYTHP EKLPGVKKDG LVRHFFHRPS 120 KAYTTGTRKR RKVHTDAHGG ETRWHKTGKT RPVFVSGKVK GYKKILVLYT NYGKQRKPEK 180 TNWVMHQYHL GSNEEEKDGE LVVSKVFYQT QPRQCGSGAK DRDTHNTTAA ALKDDSAAAI 240 VDYYNPSSLI SYDQGPHDRT SPTHLIPSFV VHADGTSFLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-121	NAC family protein