PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89611.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HD-ZIP
Protein Properties Length: 167aa    MW: 19319.4 Da    PI: 9.2625
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox566.7e-181669356
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                ++ ++++eql  Le+ F+ +++++ e++ +LA+ lgL+ rqV +W+qN+Ra++k
  RWR89611.1 16 NKKRLSQEQLMLLESSFNLEKKLQPERKIQLARDLGLQPRQVAIWYQNKRARWK 69
                56789************************************************9 PP
2HD-ZIP_I/II111.46.1e-3616107293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  +k+rls+eq+ lLE+sF+ e+kL+perK +lar+Lglqprqva+W+qn+RAR+kt+ lE dy+a+ +++d++ +e+++Lekeve+L+ el++
   RWR89611.1  16 NKKRLSQEQLMLLESSFNLEKKLQPERKIQLARDLGLQPRQVAIWYQNKRARWKTQTLECDYKAICSRLDRVLAEKKSLEKEVEKLKGELAK 107
                  79*************************************************************************************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MSLIQKPPPK HQTKHNKKRL SQEQLMLLES SFNLEKKLQP ERKIQLARDL GLQPRQVAIW  60
YQNKRARWKT QTLECDYKAI CSRLDRVLAE KKSLEKEVEK LKGELAKAHE MLRSNILPFS  120
SFSPPSEEEM SSTLHGEVNC CEEKLGVQVE ELYACLMGSG RQLGELK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.15e-20HD-ZIP family protein