PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89613.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 355aa    MW: 39234.2 Da    PI: 9.3673
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-055272323
                ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                C++Cgk F r  nL+ H r H
  RWR89613.1 52 CEICGKGFQRDQNLQLHRRGH 72
                *******************88 PP
2zf-C2H2140.00015126148123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 +kC++C+k++  +s+ k H +t+
  RWR89613.1 126 WKCEKCSKRYAVQSDWKAHSKTC 148
                 58*****************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MAGEAITKAF TQNPCVDSNP PLNLNHFRVT DPDAEVIALS PKTLMATNRF LCEICGKGFQ  60
RDQNLQLHRR GHNLPWKLKQ RSNKEPRKRV YVCPEKTCVH HHPSRALGDL TGIKKHFCRK  120
HGEKKWKCEK CSKRYAVQSD WKAHSKTCGT REYKCDCGTL FSRRDSFITH RAFCDALAEE  180
TARVTAAANF NNTLGSINVN YHFMGSSLRS NTVPHFSSIS KTISNNNEAI DQAPNTTNHH  240
PTPTDMSATA LLQKAAQIGV TSTVPSFLGG IGVKCSTQLQ GGNKYNGQMG LNPFALNFGA  300
NLENSIADIA SSNQSQLYQA KHQSAQKDDQ EGGQTRDFLG VGVQTLCSSS IHGWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03840.11e-116C2H2 family protein