PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89638.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 201aa    MW: 22150.6 Da    PI: 6.529
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-1974125256
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr+++ +g++++eIrd      ++ +r++lg+f+taeeAa a+++a+ +++g+
  RWR89638.1  74 HYRGVRRRP-WGKFASEIRD----SaRHgARIWLGTFDTAEEAAMAYDKAAYRMRGA 125
                 8********.**********....33236**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MKEENQEMFP SLHQSPAPEG ELPLNENDSQ DMVLYEVLNE AMAMRTTTIS SSPSKESNQG  60
RRGMEPTHSI RKKHYRGVRR RPWGKFASEI RDSARHGARI WLGTFDTAEE AAMAYDKAAY  120
RMRGAKALLN FPADLVIAAS SSTSSSSGYG RNKQETAISP SNSIQSSGGS TGSELLEMFL  180
KLSETEEGDK SSSCYPFNVP T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.12e-27ERF family protein