PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89691.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 180aa MW: 19638.7 Da PI: 6.764

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89691.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	29.8	1.5e-09	17	53	2	38
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHH CS HSF_DNA-bind 2 Flkklyeiledeelkeliswsengnsfvvldeeefak 38 Fl k+y++++d++++ +++ws+++nsfvv d+ ef + RWR89691.1 17 FLIKTYDMVDDPSTNAIVQWSHTSNSFVVRDPAEFGR 53 9*********************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MDGGSNIVSI SNAPPPFLIK TYDMVDDPST NAIVQWSHTS NSFVVRDPAE FGRVFSPGVH 60 GKWDSIEKKV ILKSIDCVKC LTIVSVNSSP LMKKSMVGAI QVLLVSAVLE PLTPSQADVV 120 IPELPQVHGM VPESNVADIP NENFAIPEVV GNGFISPRCP VQEWMRRCQW KKGNSRVTPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17750.1	1e-14	HSF family protein