PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89695.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 332aa MW: 36841.4 Da PI: 6.2296

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ l d+++++G g+W++ ++ g++R++k+c++rw +yl RWR89695.1 14 KGPWTPEEDQMLMDYIQRHGHGSWRSLPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	31.5	4.1e-10	68	93	22	48
T-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqkyl 48 g+W++Ia++++ gRt++++k++w+++l RWR89695.1 68 GRWSSIANHLP-GRTDNEIKNYWNTHL 93 35*******.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MGRAPCCDEV GIKKGPWTPE EDQMLMDYIQ RHGHGSWRSL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGRW SSIANHLPGR TDNEIKNYWN THLRKKLLQM GIDPVTHRPR TDLNLLGGLS 120 DFLAVSNVCS LMNPWDAAHL ARIQLLQTLL GAMTSNIHPA MNLMGSSSSN DYQLNEFLRS 180 NCQLDGLLDG SLGVTNDPTP THSNFSNLGI QQVPYHYQAL EESSVSLKGA INGTVSKTPD 240 CDMYGGSNNI YNQMAIPCAI PPAVPTPPLD SSSPELSNGV ETFKDNVNPT EFSTPSSTST 300 TFDAWRELNL DNQSWADIIE QTSPPSWTTE QL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	1e-77	MYB family protein