PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89752.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 231aa    MW: 25182 Da    PI: 7.128
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000116284123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  RWR89752.1 62 YTCTFCRREFRSAQALGGHMNVH 84
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MAADLGPLSL TQLLELNQQH TNPTSWMWNS RGPPDEDDSW VVRAFAEDTS NVMGSTWPPR  60
SYTCTFCRRE FRSAQALGGH MNVHRRDRAR LHQLSPGSDP LPSSASPPPL MFPTQELVAS  120
GALCLFYPFP TSNPVFTPSR ITSSSLDSPS TLLSISPYSA NSLIPPSSSS TDFLVAKGTH  180
HATVSRSAKV ESNRTMNNNK KKDDTNNSSS NSSGASGFEE LDLELRLGQK P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.13e-30C2H2 family protein