PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89769.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 311aa MW: 35309.3 Da PI: 5.0105

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.7	3e-14	14	59	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde+l d+vk++G+++W++I ++ + Rt+k+c++rw + RWR89769.1 14 KGPWMAEEDEILMDYVKKYGPRDWSSIQSKGLLPRTGKSCRLRWVN 59 79***********************9987777********87 PP
2	Myb_DNA-binding	45.5	1.8e-14	70	110	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++eE+ + +d+ +q+G++ W++I+ +++ gRt++++k++w RWR89769.1 70 KFSAEEERIVIDLQAQFGNK-WAKISTYLP-GRTDNDVKNFWS 110 79****************.*****.*********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MAGRCRDDGL VMRKGPWMAE EDEILMDYVK KYGPRDWSSI QSKGLLPRTG KSCRLRWVNK 60 LKPNLKTGCK FSAEEERIVI DLQAQFGNKW AKISTYLPGR TDNDVKNFWS TRQKRLARML 120 QTTPPPKSHK HEGKVPVLRE ETAVKAPRLN SMPQEESSKG QSSESSYMGK SDIIEMVQLQ 180 DLVKKPNLFN FDTSLPPLEY FDVEMMEKNP CLNLPFAQPS QMPLDITLLQ ESQGFINGVD 240 NTNSLGLFPC QEALELDDAL QLPLGMQFSE LDGQLGGKQE VDSVSNPKTY IGDFPADMLD 300 YFESTPSMLE W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	2e-64	MYB family protein