PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89770.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 328aa    MW: 35372.5 Da    PI: 7.5765
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.17.5e-1293137347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+  ++ + ++lG+g+W+ I+r +   R++ q+ s+ qky
       RWR89770.1  93 PWTEDEHRMFLLGLQKLGKGDWRGISRNFVVSRSPTQVASHAQKY 137
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MTRKCSHCSH NGHNSRTCPN KGVKLFGVRL TDGSIRKSAS MGNLTHFSES GGNTPGSPAD  60
NPDPGAAADG YASEDFVPGS SSASCRERKK GVPWTEDEHR MFLLGLQKLG KGDWRGISRN  120
FVVSRSPTQV ASHAQKYFIR QTNMSRRKRR SSLFDIVADE SIDTPLVSRD LFPISHPQPE  180
TQSSKPLPSP PAIDEECESM ESANSNDIEA VVPKPENSQC GYPVVFPAYF SPCLAYPFPF  240
WAGYTAEAVE KETHEVVRPT AIHSKKPINV DELVGMSNLT LGESLGNKAP SSLSLELVDG  300
SGRQSAFHAN PGTSGKGLSS SSSPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-115MYB_related family protein