PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89780.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 253aa    MW: 27529.6 Da    PI: 5.1502
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89780.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-1869118255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  RWR89780.1  69 TYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAALTIKG 118
                 69****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEASSNKECA SNKCSSSSSS SSSSSDSDRS DKISIQGSSM AMANANANAK ANEMGKKRPV  60
SGNDGRHPTY RGVRMRNWGK WVSEIREPRK KSRIWLGTFA TPEMAARAHD VAALTIKGQA  120
AYLNFPEMAP QLPRPASSSP KDIQAAAAKA ANLVLGEPRS LQPLDQNQPV DLPLISQESS  180
SSPSPSPSPS ITAKADDDDR MLFDLPDLLH DLQCNLTTPT DEFYYCSLSW IAAGADAGIQ  240
LEEPFLWEER DYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-45ERF family protein